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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891119.1_cds_XP_016445848.1_40763
CDS Infomation

[gene=LOC107771032] [db_xref=GeneID:107771032] [protein=probable polygalacturonase At3g15720] [protein_id=XP_016445848.1] [location=join(45596..45727,45817..45954,46050..46205,46639..46656,46754..46961,47056..47137,47227..47335,47469..47582,47664..47885)] [gbkey=CDS]
Sequence

ATGAAGATGCTCATCTCATACTTTTTTGCTCTACTACTTTTGCCTTCTTTGGTTTTTTCT
GTACATGATTCTCCAGTATTTAATGTTCTGGATTATGGTGCAGTTGGAGATGGCTTGGCC
GATTCAACCAATGCTTTCAACAAAACATGGGAAGCAACATGCTCGTCATCGTCATCTTCT
CCAACTATGTACGTTCCCTTTGGCAATACGTTCTTGATTCATCCCTTGAAACTGAGTGGC
CCTTGCTCATCACCAGGCATTACTATTGAGATAAATGGAAATATAGTTGCACCAATTGAA
CCCTCGGAATGGACGTGTTTGACCACTCATTGTGATAAGTGGATTTATATTAAACATGTT
AACGGCCTTACAGTACGTGGGAGTGGAACAATTAATGGTCGGGGACACAAATGGTGGGAT
GTTAATGACCGCAGGAAACCAACTGCTTTTGATATTTCACATAGCCAAAACATTAGTGTA
AGCGGACTGAGGTTTAAGGACAACCCTCACGTTCATTTTCATATTGAGGACTCCGAATCT
GCTACTGTCTCAAACATAACCATAGACGCCCCAGCAAAAAGTCCAAATACTGATGGTATT
CATCTTTCTAGCAGCCGAGACGTTTCCATTAACCATTGTCGAATTGGAACTGGGGATGAT
TGTATCTCAATTGTAGATGGATGTTCCAATCTGAAAATCAGCAACATAATATGCGGACCA
GGGCATGGTATAAGTATTGGAAGTCTAGGCAAGCATGGATCAAACGACACTGTTGAAAAT
GTTCTTGTCAGTGATGTGGTGTTCATAAAATCTACAAATGGTGCTCGGATAAAGACATGG
CAGGGAGGCCAAGGATACGCTAAGAACATCATTTTCGAGAGAATATTGTCGCAAGATTCT
CATAACCCTATAATTATCGATCAGTTCTATTGTGATCATGAAAACTGTATAGAACAAGAT
TTAGCAGTACAGGTTAGTGGTATTACTTTTAGACAGATACTTGGAACTTCCCAAGGTGAA
TTTGCTGTGAAGCTTGATTGCAGTGCTAAAGTTCCATGTACGGGTATATTAATGGAGGAT
ATATACATCCGTTCAGGCACCAAACGTGAAGCTAAATCGTATATTAATAGTGCACATGGA
TTTGTTAAGGGTCAAAATTTACCTGAAATCCGCCTTTGA

Peptide Sequence

PEP ID

XP_016445848.1
PEP Infomation

PREDICTED: probable polygalacturonase At3g15720 [Nicotiana tabacum]
Sequence

MKMLISYFFALLLLPSLVFSVHDSPVFNVLDYGAVGDGLADSTNAFNKTWEATCSSSSSS
PTMYVPFGNTFLIHPLKLSGPCSSPGITIEINGNIVAPIEPSEWTCLTTHCDKWIYIKHV
NGLTVRGSGTINGRGHKWWDVNDRRKPTAFDISHSQNISVSGLRFKDNPHVHFHIEDSES
ATVSNITIDAPAKSPNTDGIHLSSSRDVSINHCRIGTGDDCISIVDGCSNLKISNIICGP
GHGISIGSLGKHGSNDTVENVLVSDVVFIKSTNGARIKTWQGGQGYAKNIIFERILSQDS
HNPIIIDQFYCDHENCIEQDLAVQVSGITFRQILGTSQGEFAVKLDCSAKVPCTGILMED
IYIRSGTKREAKSYINSAHGFVKGQNLPEIRL

Transcript Sequence

Gene sequence data has not been registered.